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Genetical genomics of Populus leaf shape variation.

Identifieur interne : 001D47 ( Main/Exploration ); précédent : 001D46; suivant : 001D48

Genetical genomics of Populus leaf shape variation.

Auteurs : Derek R. Drost [États-Unis] ; Swati Puranik [États-Unis] ; Evandro Novaes [États-Unis, Brésil] ; Carolina R D B. Novaes [États-Unis, Brésil] ; Christopher Dervinis [États-Unis] ; Oliver Gailing [États-Unis] ; Matias Kirst [États-Unis]

Source :

RBID : pubmed:26122556

Descripteurs français

English descriptors

Abstract

BACKGROUND

Leaf morphology varies extensively among plant species and is under strong genetic control. Mutagenic screens in model systems have identified genes and established molecular mechanisms regulating leaf initiation, development, and shape. However, it is not known whether this diversity across plant species is related to naturally occurring variation at these genes. Quantitative trait locus (QTL) analysis has revealed a polygenic control for leaf shape variation in different species suggesting that loci discovered by mutagenesis may only explain part of the naturally occurring variation in leaf shape. Here we undertook a genetical genomics study in a poplar intersectional pseudo-backcross pedigree to identify genetic factors controlling leaf shape. The approach combined QTL discovery in a genetic linkage map anchored to the Populus trichocarpa reference genome sequence and transcriptome analysis.

RESULTS

A major QTL for leaf lamina width and length:width ratio was identified in multiple experiments that confirmed its stability. A transcriptome analysis of expanding leaf tissue contrasted gene expression between individuals with alternative QTL alleles, and identified an ADP-ribosylation factor (ARF) GTPase (PtARF1) as a candidate gene for regulating leaf morphology in this pedigree. ARF GTPases are critical elements in the vesicular trafficking machinery. Disruption of the vesicular trafficking function of ARF by the pharmacological agent Brefeldin A (BFA) altered leaf lateral growth in the narrow-leaf P. trichocarpa suggesting a molecular mechanism of leaf shape determination. Inhibition of the vesicular trafficking processes by BFA interferes with cycling of PIN proteins and causes their accumulation in intercellular compartments abolishing polar localization and disrupting normal auxin flux with potential effects on leaf expansion.

CONCLUSIONS

In other model systems, ARF proteins have been shown to control the localization of auxin efflux carriers, which function to establish auxin gradients and apical-basal cell polarity in developing plant organs. Our results support a model where PtARF1 transcript abundance changes the dynamics of endocytosis-mediated PIN localization in leaf cells, thus affecting lateral auxin flux and subsequently lamina leaf expansion. This suggests that evolution of differential cellular polarity plays a significant role in leaf morphological variation observed in subgenera of genus Populus.


DOI: 10.1186/s12870-015-0557-7
PubMed: 26122556
PubMed Central: PMC4486686


Affiliations:


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<nlm:affiliation>School of Forest Resources and Conservation, University of Florida, P.O. Box 110410, Gainesville, FL, 32611, USA. scderv@ufl.edu.</nlm:affiliation>
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<name sortKey="Gailing, Oliver" sort="Gailing, Oliver" uniqKey="Gailing O" first="Oliver" last="Gailing">Oliver Gailing</name>
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<term>ADP-Ribosylation Factors (genetics)</term>
<term>ADP-Ribosylation Factors (metabolism)</term>
<term>Brefeldin A (pharmacology)</term>
<term>GTP Phosphohydrolases (genetics)</term>
<term>GTP Phosphohydrolases (metabolism)</term>
<term>Hybridization, Genetic (MeSH)</term>
<term>Plant Leaves (anatomy & histology)</term>
<term>Plant Leaves (genetics)</term>
<term>Populus (anatomy & histology)</term>
<term>Populus (genetics)</term>
<term>Quantitative Trait Loci (MeSH)</term>
<term>Transcriptome (MeSH)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Bréfeldine A (pharmacologie)</term>
<term>Facteurs d'ADP-ribosylation (génétique)</term>
<term>Facteurs d'ADP-ribosylation (métabolisme)</term>
<term>Feuilles de plante (anatomie et histologie)</term>
<term>Feuilles de plante (génétique)</term>
<term>Hybridation génétique (MeSH)</term>
<term>Locus de caractère quantitatif (MeSH)</term>
<term>Populus (anatomie et histologie)</term>
<term>Populus (génétique)</term>
<term>Transcriptome (MeSH)</term>
<term>dGTPases (génétique)</term>
<term>dGTPases (métabolisme)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en">
<term>ADP-Ribosylation Factors</term>
<term>GTP Phosphohydrolases</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en">
<term>ADP-Ribosylation Factors</term>
<term>GTP Phosphohydrolases</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="pharmacology" xml:lang="en">
<term>Brefeldin A</term>
</keywords>
<keywords scheme="MESH" qualifier="anatomie et histologie" xml:lang="fr">
<term>Feuilles de plante</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="anatomy & histology" xml:lang="en">
<term>Plant Leaves</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en">
<term>Plant Leaves</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr">
<term>Facteurs d'ADP-ribosylation</term>
<term>Feuilles de plante</term>
<term>Populus</term>
<term>dGTPases</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr">
<term>Facteurs d'ADP-ribosylation</term>
<term>dGTPases</term>
</keywords>
<keywords scheme="MESH" qualifier="pharmacologie" xml:lang="fr">
<term>Bréfeldine A</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Hybridization, Genetic</term>
<term>Quantitative Trait Loci</term>
<term>Transcriptome</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Hybridation génétique</term>
<term>Locus de caractère quantitatif</term>
<term>Transcriptome</term>
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<div type="abstract" xml:lang="en">
<p>
<b>BACKGROUND</b>
</p>
<p>Leaf morphology varies extensively among plant species and is under strong genetic control. Mutagenic screens in model systems have identified genes and established molecular mechanisms regulating leaf initiation, development, and shape. However, it is not known whether this diversity across plant species is related to naturally occurring variation at these genes. Quantitative trait locus (QTL) analysis has revealed a polygenic control for leaf shape variation in different species suggesting that loci discovered by mutagenesis may only explain part of the naturally occurring variation in leaf shape. Here we undertook a genetical genomics study in a poplar intersectional pseudo-backcross pedigree to identify genetic factors controlling leaf shape. The approach combined QTL discovery in a genetic linkage map anchored to the Populus trichocarpa reference genome sequence and transcriptome analysis.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>RESULTS</b>
</p>
<p>A major QTL for leaf lamina width and length:width ratio was identified in multiple experiments that confirmed its stability. A transcriptome analysis of expanding leaf tissue contrasted gene expression between individuals with alternative QTL alleles, and identified an ADP-ribosylation factor (ARF) GTPase (PtARF1) as a candidate gene for regulating leaf morphology in this pedigree. ARF GTPases are critical elements in the vesicular trafficking machinery. Disruption of the vesicular trafficking function of ARF by the pharmacological agent Brefeldin A (BFA) altered leaf lateral growth in the narrow-leaf P. trichocarpa suggesting a molecular mechanism of leaf shape determination. Inhibition of the vesicular trafficking processes by BFA interferes with cycling of PIN proteins and causes their accumulation in intercellular compartments abolishing polar localization and disrupting normal auxin flux with potential effects on leaf expansion.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>CONCLUSIONS</b>
</p>
<p>In other model systems, ARF proteins have been shown to control the localization of auxin efflux carriers, which function to establish auxin gradients and apical-basal cell polarity in developing plant organs. Our results support a model where PtARF1 transcript abundance changes the dynamics of endocytosis-mediated PIN localization in leaf cells, thus affecting lateral auxin flux and subsequently lamina leaf expansion. This suggests that evolution of differential cellular polarity plays a significant role in leaf morphological variation observed in subgenera of genus Populus.</p>
</div>
</front>
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<Month>04</Month>
<Day>12</Day>
</DateCompleted>
<DateRevised>
<Year>2018</Year>
<Month>11</Month>
<Day>13</Day>
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<Volume>15</Volume>
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<Year>2015</Year>
<Month>Jun</Month>
<Day>30</Day>
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<Title>BMC plant biology</Title>
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<ArticleTitle>Genetical genomics of Populus leaf shape variation.</ArticleTitle>
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<MedlinePgn>166</MedlinePgn>
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<ELocationID EIdType="doi" ValidYN="Y">10.1186/s12870-015-0557-7</ELocationID>
<Abstract>
<AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Leaf morphology varies extensively among plant species and is under strong genetic control. Mutagenic screens in model systems have identified genes and established molecular mechanisms regulating leaf initiation, development, and shape. However, it is not known whether this diversity across plant species is related to naturally occurring variation at these genes. Quantitative trait locus (QTL) analysis has revealed a polygenic control for leaf shape variation in different species suggesting that loci discovered by mutagenesis may only explain part of the naturally occurring variation in leaf shape. Here we undertook a genetical genomics study in a poplar intersectional pseudo-backcross pedigree to identify genetic factors controlling leaf shape. The approach combined QTL discovery in a genetic linkage map anchored to the Populus trichocarpa reference genome sequence and transcriptome analysis.</AbstractText>
<AbstractText Label="RESULTS" NlmCategory="RESULTS">A major QTL for leaf lamina width and length:width ratio was identified in multiple experiments that confirmed its stability. A transcriptome analysis of expanding leaf tissue contrasted gene expression between individuals with alternative QTL alleles, and identified an ADP-ribosylation factor (ARF) GTPase (PtARF1) as a candidate gene for regulating leaf morphology in this pedigree. ARF GTPases are critical elements in the vesicular trafficking machinery. Disruption of the vesicular trafficking function of ARF by the pharmacological agent Brefeldin A (BFA) altered leaf lateral growth in the narrow-leaf P. trichocarpa suggesting a molecular mechanism of leaf shape determination. Inhibition of the vesicular trafficking processes by BFA interferes with cycling of PIN proteins and causes their accumulation in intercellular compartments abolishing polar localization and disrupting normal auxin flux with potential effects on leaf expansion.</AbstractText>
<AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">In other model systems, ARF proteins have been shown to control the localization of auxin efflux carriers, which function to establish auxin gradients and apical-basal cell polarity in developing plant organs. Our results support a model where PtARF1 transcript abundance changes the dynamics of endocytosis-mediated PIN localization in leaf cells, thus affecting lateral auxin flux and subsequently lamina leaf expansion. This suggests that evolution of differential cellular polarity plays a significant role in leaf morphological variation observed in subgenera of genus Populus.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Drost</LastName>
<ForeName>Derek R</ForeName>
<Initials>DR</Initials>
<AffiliationInfo>
<Affiliation>School of Forest Resources and Conservation, University of Florida, P.O. Box 110410, Gainesville, FL, 32611, USA. ddrost1@gmail.com.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Plant Molecular and Cellular Biology Graduate Program, University of Florida, P.O. Box 110690, Gainesville, FL, 32611, USA. ddrost1@gmail.com.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Seminis, Inc., 37437 State Highway 16, Woodland, CA, 95695, USA. ddrost1@gmail.com.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Puranik</LastName>
<ForeName>Swati</ForeName>
<Initials>S</Initials>
<AffiliationInfo>
<Affiliation>School of Forest Resourse and Environmental Sciences, Michigan Technological University, Houghton, MI, 49931, USA. spuranik@mtu.edu.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Novaes</LastName>
<ForeName>Evandro</ForeName>
<Initials>E</Initials>
<AffiliationInfo>
<Affiliation>School of Forest Resources and Conservation, University of Florida, P.O. Box 110410, Gainesville, FL, 32611, USA. novaes@ufg.br.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Escola de Agronomia, Universidade Federal de Goiás, Rodovia Goiânia/Nova Veneza, Km0 - Caixa Postal 131, Goiânia, GO, 74690-900, Brazil. novaes@ufg.br.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Novaes</LastName>
<ForeName>Carolina R D B</ForeName>
<Initials>CR</Initials>
<AffiliationInfo>
<Affiliation>School of Forest Resources and Conservation, University of Florida, P.O. Box 110410, Gainesville, FL, 32611, USA. cboaventura@gmail.com.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Escola de Agronomia, Universidade Federal de Goiás, Rodovia Goiânia/Nova Veneza, Km0 - Caixa Postal 131, Goiânia, GO, 74690-900, Brazil. cboaventura@gmail.com.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Dervinis</LastName>
<ForeName>Christopher</ForeName>
<Initials>C</Initials>
<AffiliationInfo>
<Affiliation>School of Forest Resources and Conservation, University of Florida, P.O. Box 110410, Gainesville, FL, 32611, USA. scderv@ufl.edu.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Gailing</LastName>
<ForeName>Oliver</ForeName>
<Initials>O</Initials>
<AffiliationInfo>
<Affiliation>School of Forest Resourse and Environmental Sciences, Michigan Technological University, Houghton, MI, 49931, USA. ogailing@mtu.edu.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Kirst</LastName>
<ForeName>Matias</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>School of Forest Resources and Conservation, University of Florida, P.O. Box 110410, Gainesville, FL, 32611, USA. mkirst@ufl.edu.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Plant Molecular and Cellular Biology Graduate Program, University of Florida, P.O. Box 110690, Gainesville, FL, 32611, USA. mkirst@ufl.edu.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>University of Florida Genetics Institute, University of Florida, P.O. Box 103610, Gainesville, FL, 32611, USA. mkirst@ufl.edu.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<DataBankList CompleteYN="Y">
<DataBank>
<DataBankName>GEO</DataBankName>
<AccessionNumberList>
<AccessionNumber>GSE12623</AccessionNumber>
<AccessionNumber>GSE20117</AccessionNumber>
<AccessionNumber>GSE20118</AccessionNumber>
</AccessionNumberList>
</DataBank>
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<PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2015</Year>
<Month>06</Month>
<Day>30</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>England</Country>
<MedlineTA>BMC Plant Biol</MedlineTA>
<NlmUniqueID>100967807</NlmUniqueID>
<ISSNLinking>1471-2229</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList>
<Chemical>
<RegistryNumber>20350-15-6</RegistryNumber>
<NameOfSubstance UI="D020126">Brefeldin A</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>EC 3.6.1.-</RegistryNumber>
<NameOfSubstance UI="D020558">GTP Phosphohydrolases</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>EC 3.6.5.2</RegistryNumber>
<NameOfSubstance UI="D020727">ADP-Ribosylation Factors</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList>
<MeshHeading>
<DescriptorName UI="D020727" MajorTopicYN="N">ADP-Ribosylation Factors</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D020126" MajorTopicYN="N">Brefeldin A</DescriptorName>
<QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D020558" MajorTopicYN="N">GTP Phosphohydrolases</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D006824" MajorTopicYN="N">Hybridization, Genetic</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName>
<QualifierName UI="Q000033" MajorTopicYN="Y">anatomy & histology</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName>
<QualifierName UI="Q000033" MajorTopicYN="N">anatomy & histology</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D040641" MajorTopicYN="Y">Quantitative Trait Loci</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D059467" MajorTopicYN="N">Transcriptome</DescriptorName>
</MeshHeading>
</MeshHeadingList>
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<Year>2015</Year>
<Month>03</Month>
<Day>11</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted">
<Year>2015</Year>
<Month>06</Month>
<Day>16</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez">
<Year>2015</Year>
<Month>7</Month>
<Day>1</Day>
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<Year>2015</Year>
<Month>7</Month>
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<Year>2016</Year>
<Month>4</Month>
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</ArticleIdList>
<ReferenceList>
<Reference>
<Citation>Proc Natl Acad Sci U S A. 2003 May 27;100(11):6837-42</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">12750468</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nat Genet. 2005 Jul;37(7):710-7</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15965475</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant J. 2011 Oct;68(1):147-58</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">21668538</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Genetics. 2007 Mar;175(3):1441-50</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">17179097</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant J. 2009 Jun;58(6):1054-67</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">19220791</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Development. 1996 May;122(5):1589-600</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">8625845</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Trends Cell Biol. 2000 Feb;10(2):60-7</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">10652516</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nature. 2001 Sep 27;413(6854):425-8</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">11574889</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Cell. 2009 Mar 20;136(6):1005-16</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">19303845</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Proc Natl Acad Sci U S A. 2002 Nov 12;99(23):14903-6</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">12415114</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Tree Physiol. 2005 Apr;25(4):425-35</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15687091</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Cell. 2003 Jan 24;112(2):219-30</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">12553910</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Curr Opin Plant Biol. 2005 Feb;8(1):59-66</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15653401</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Genes Dev. 1998 Aug 1;12(15):2381-91</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">9694802</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nature. 2003 Mar 20;422(6929):297-302</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">12646919</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant Physiol. 2004 Aug;135(4):2368-78</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15299141</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Am J Bot. 1997 Feb;84(2):143</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">21712194</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>PLoS One. 2012;7(9):e44397</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">22973444</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nature. 2003 Nov 20;426(6964):255-60</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">14628043</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Curr Opin Plant Biol. 2007 Dec;10(6):616-23</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">17720615</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nat Rev Genet. 2009 May;10(5):305-17</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">19360022</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nat Genet. 2006 Aug;38(8):942-7</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16823378</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Theor Appl Genet. 2009 Oct;119(6):1069-83</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">19626310</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Genetics. 1994 Apr;136(4):1447-55</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">8013917</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Science. 2002 Apr 26;296(5568):752-5</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">11923494</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant Biol (Stuttg). 2004 Jan-Feb;6(1):2-4</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15095128</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Trends Plant Sci. 2008 Feb;13(2):72-7</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">18262820</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>BMC Plant Biol. 2014;14:31</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">24438179</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Trends Genet. 2001 Jul;17(7):388-91</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">11418218</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Evol Dev. 2005 May-Jun;7(3):259-71</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15876198</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Proc Natl Acad Sci U S A. 1993 Dec 1;90(23):10972-6</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">8248199</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>EMBO J. 2002 Mar 15;21(6):1267-79</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">11889033</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nucleic Acids Res. 2012 Jan;40(Database issue):D1178-86</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">22110026</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Annu Rev Plant Biol. 2006;57:477-96</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16669771</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nature. 2003 Jul 10;424(6945):147-51</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">12853946</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant Biol (Stuttg). 2008 Sep;10(5):624-34</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">18761500</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant J. 2005 Jul;43(1):68-78</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15960617</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Science. 2006 Sep 15;313(5793):1596-604</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16973872</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nat Genet. 2008 Sep;40(9):1136-41</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">19165928</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Genetics. 1994 Apr;136(4):1457-68</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">8013918</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nature. 2008 Dec 18;456(7224):962-6</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">18953331</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Genetics. 2003 Nov;165(3):1541-50</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">14668401</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Genetics. 2005 Apr;169(4):2295-303</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15687266</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant Cell. 2015 Apr;27(4):969-83</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">25873386</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant Cell. 2005 Feb;17(2):525-36</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15659621</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant Physiol. 2014 Mar;164(3):1309-25</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">24394778</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Genes Dev. 2006 Apr 15;20(8):1015-27</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16618807</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Planta. 2002 Mar;214(5):694-702</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">11882937</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>BMC Plant Biol. 2012;12:47</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">22471289</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Proc Natl Acad Sci U S A. 2010 May 4;107(18):8492-7</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">20404162</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant Physiol. 2003 Oct;133(2):597-605</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">14500790</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Science. 2006 May 12;312(5775):883</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16601151</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Mol Cell. 1999 Mar;3(3):275-85</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">10198630</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant J. 2004 May;38(4):699-713</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15125775</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Science. 1999 Oct 8;286(5438):316-8</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">10514379</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Curr Biol. 2002 Feb 19;12(4):329-34</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">11864575</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>New Phytol. 2009 Jun;182(4):878-90</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">19291008</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Plant J. 2006 Nov;48(3):321-41</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">17005011</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>BMC Genomics. 2008;9:589</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">19061504</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
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<li>États-Unis</li>
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<name sortKey="Drost, Derek R" sort="Drost, Derek R" uniqKey="Drost D" first="Derek R" last="Drost">Derek R. Drost</name>
<name sortKey="Gailing, Oliver" sort="Gailing, Oliver" uniqKey="Gailing O" first="Oliver" last="Gailing">Oliver Gailing</name>
<name sortKey="Kirst, Matias" sort="Kirst, Matias" uniqKey="Kirst M" first="Matias" last="Kirst">Matias Kirst</name>
<name sortKey="Kirst, Matias" sort="Kirst, Matias" uniqKey="Kirst M" first="Matias" last="Kirst">Matias Kirst</name>
<name sortKey="Kirst, Matias" sort="Kirst, Matias" uniqKey="Kirst M" first="Matias" last="Kirst">Matias Kirst</name>
<name sortKey="Novaes, Carolina R D B" sort="Novaes, Carolina R D B" uniqKey="Novaes C" first="Carolina R D B" last="Novaes">Carolina R D B. Novaes</name>
<name sortKey="Novaes, Evandro" sort="Novaes, Evandro" uniqKey="Novaes E" first="Evandro" last="Novaes">Evandro Novaes</name>
<name sortKey="Puranik, Swati" sort="Puranik, Swati" uniqKey="Puranik S" first="Swati" last="Puranik">Swati Puranik</name>
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<name sortKey="Novaes, Evandro" sort="Novaes, Evandro" uniqKey="Novaes E" first="Evandro" last="Novaes">Evandro Novaes</name>
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<name sortKey="Novaes, Carolina R D B" sort="Novaes, Carolina R D B" uniqKey="Novaes C" first="Carolina R D B" last="Novaes">Carolina R D B. Novaes</name>
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{{Explor lien
   |wiki=    Bois
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   |clé=     pubmed:26122556
   |texte=   Genetical genomics of Populus leaf shape variation.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:26122556" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a PoplarV1 

Wicri

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